subset_snp: Subset data frame for specific SNPs

In JulFriedrich/miRetrieve: miRNA Text Mining in Abstracts

Description

Subset data frame for specific SNPs only.

Usage

subset_snp(df, snp.retain, col.snp = SNPs)

Arguments

df	Data frame containing SNPs.
snp.retain	Character vector. Vector specifying which SNPs to keep. SNPs in snp.retain must match SNPs in col.snp in df.
col.snp	Symbol. Column containing SNPs.

Details

Subset data frame for specific SNPs only.

Value

Data frame containing only specified SNPs. If no SNP in snp.retain matches a SNP in col.snp, subset_snp() stops with a warning saying "No SNP in 'snp.retain' matches a SNP in 'col.snp'. Could not filter for SNP.".

See Also

extract_snp(), count_snp(), get_snp()

Other subset functions: subset_df(), subset_mir_threshold(), subset_mir(), subset_research(), subset_review(), subset_year()

JulFriedrich/miRetrieve documentation built on Sept. 20, 2021, 11:37 p.m.