GetTopics: Extract Topic Information
In JuliusCampbell/TITAN: Builds LDA Topic Models for scRNA-seq data
GetTopics R Documentation
Extract Topic Information
Description
This function extracts the cell-topic information from the LDA model. The output matrix is the cell-topic matrix giving a normalized score of how much each cell corresponds with each topic
Usage
GetTopics(model, Object)
Arguments
model
LDA model.
Object
Seurat object containing the data the model was created with.
Value
document-topic matrix
Examples
GetTopics(LDA_model, SeuratObj)
JuliusCampbell/TITAN documentation built on May 24, 2023, 3:42 p.m.
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
| GetTopics | R Documentation |
Extract Topic Information
Description
This function extracts the cell-topic information from the LDA model. The output matrix is the cell-topic matrix giving a normalized score of how much each cell corresponds with each topic
Usage
GetTopics(model, Object)
Arguments
model |
LDA model. |
Object |
Seurat object containing the data the model was created with. |
Value
document-topic matrix
Examples
GetTopics(LDA_model, SeuratObj)
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
Embedding an R snippet on your website
Add the following code to your website.
For more information on customizing the embed code, read Embedding Snippets.