SCE_FeaturePlot: TopicWordTable function for SingleCellExperiment

In JuliusCampbell/TITAN: Builds LDA Topic Models for scRNA-seq data

TopicWordTable function for SingleCellExperiment

Description

Returns a dataframe with the top n genes per topic

Usage

SCE_FeaturePlot(Model, nGenes = 50)

Arguments

Model	LDA Model Object
nGenes	Number of genes do you want returned per topic

Value

Returns a ggplot object or list of ggplot objects

Examples

SCE_FeaturePlot(SCE, 0.01, 1:12, 4, 'q5')

JuliusCampbell/TITAN documentation built on May 24, 2023, 3:42 p.m.