ImputeAndAddTopics: Adds imputed Topics to a seruat object

In JuliusCampbell/TITAN: Builds LDA Topic Models for scRNA-seq data

Adds imputed Topics to a seruat object

Description

This function adds the topic-document information as individual columns to the Seurat metadata for each topic

Usage

ImputeAndAddTopics(Object, model, TopicPrefix = "ImputedTopic")

Arguments

Object	Seurat object containing the data the model was created with.
model	LDA model output
TopicPrefix	Prefix of Topics to be added to your metaData (Default "ImputedTopic")

Value

Seurat object with updated metadata of imputed geneExpression

Examples

ImputeAndAddTopics(SeuratObj, LDAmodel, TopicPrefix = "ImputedTopic")

JuliusCampbell/TITAN documentation built on May 24, 2023, 3:42 p.m.