bin_boundaries: Determine bin boundaries
In JunyanSong/SCclust: Single Cell Copy Number Analysis and Clustering
bin_boundaries R Documentation
Determine bin boundaries
Description
Make bin boundary files: bin.boundaries.nk.sorted.txt
Usage
bin_boundaries(data_dir, bincount = 5000)
Arguments
data_dir
The directory that contains mappable region file (mappable.regions.txt) generated by simulation of reference genome.
Also contains the output files: bin boundary file (bin.boundaries.nk.sorted.txt), mappable.regions.sorted.txt, chrom.mappable.txt.
bincount
An integer. The number of bins. Default value: 5000.
JunyanSong/SCclust documentation built on April 16, 2022, 8:44 p.m.
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| bin_boundaries | R Documentation |
Determine bin boundaries
Description
Make bin boundary files: bin.boundaries.nk.sorted.txt
Usage
bin_boundaries(data_dir, bincount = 5000)
Arguments
data_dir |
The directory that contains mappable region file (mappable.regions.txt) generated by simulation of reference genome. Also contains the output files: bin boundary file (bin.boundaries.nk.sorted.txt), mappable.regions.sorted.txt, chrom.mappable.txt. |
bincount |
An integer. The number of bins. Default value: 5000. |
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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