fdr_fisherPV | R Documentation |
Linear fit to the tail of empirical null distribution of Fisher p-values; FDR computation: compare true to simulated CDF(empirical null).
fdr_fisherPV(true_fisherPV, sim_fisherPV, cell_names, lm_max = 0.001, graphic = TRUE)
true_fisherPV |
The Fisher's test p-values for the observation. |
sim_fisherPV |
The Fisher's test p-values for the permutations. |
cell_names |
A character vector. The names of cells. |
lm_max |
Numeric value. Default: 0.001. The threshold parameter for the linear fit. |
graphic |
Logical. If TRUE (Default), generate the CDF plots of p-values and FDR values. |
A list containing the matrix of the FDR values (mat_fdr) and distance matrix based on Fisher's test p-values (mat_dist).
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