getCoalescentSim: getCoalescentSim
In KosukeHamazaki/myBreedSimulatR: R Breeding Simulator for K.Hamazaki

getCoalescentSim

R Documentation

getCoalescentSim

Description

getCoalescentSim

Usage

getCoalescentSim(
  nPopsSamples = NULL,
  effPopSize = 100,
  nChr = 7,
  nPiecesPerChr = 15000,
  recBTpieces = 1e-04,
  nMrkOrMut = 100,
  minMAF = 0.01,
  seed = as.integer(Sys.time()),
  tree = 0,
  mutRate = 1e-08
)

Arguments

`nPopsSamples`	-pop[2] (GENOME)
`effPopSize`	-N (GENOME)
`nChr`	-c (GENOME)
`nPiecesPerChr`	-pieces (GENOME)
`recBTpieces`	-rec (GENOME)
`nMrkOrMut`	parameter to calculate -s (GENOME)
`minMAF`	-maf (GENOME)
`seed`	-seed (GENOME)
`tree`	-tree (GENOME)