datasets: Reference dataset extractors

In LTLA/SingleR: Reference-Based Single-Cell RNA-Seq Annotation

Reference dataset extractors

Description

These dataset getter functions are deprecated as they have been migrated to the celldex package for more general use throughout the Bioconductor package ecosystem.

Usage

HumanPrimaryCellAtlasData(...)

BlueprintEncodeData(...)

ImmGenData(...)

MouseRNAseqData(...)

DatabaseImmuneCellExpressionData(...)

NovershternHematopoieticData(...)

MonacoImmuneData(...)

Arguments

...	Further arguments to pass to the celldex function of the same name.

Value

A SummarizedExperiment object containing the reference dataset.

Author(s)

Aaron Lun

LTLA/SingleR documentation built on Feb. 28, 2024, 2:05 a.m.