R/covComb_tx_deg-data.R

In LieberInstitute/qsvaR: Generate Quality Surrogate Variable Analysis for Degradation Correction

#' RSE object of RNA-seq data that serves as output for degradation analysis
#'
#' This data was generated from an experiment using degraded RNA-seq samples
#' post-mortem brain tissue. The transcripts included are the result of the qsva
#' expanded framework study and will be used to remove the effect of degradation
#' in bulk RNA-seq data.
#'
#'
#' @name covComb_tx_deg
#' @docType data
#' @format A [RangedSummarizedExperiment-class][SummarizedExperiment::RangedSummarizedExperiment-class]
#' @keywords datasets
#' @seealso [getPCs] [k_qsvs] [getDegTx]
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