sanitizeSeq: Remove invalid characters in DNA sequence
In LoadingBFX/rsrm: Locating restriction sites around specific target sequence and construct restriction map by fragments
Description
Usage
Arguments
Value
References
Description
Remove FASTA header and all letters except A, T, C, G.
This function is adapted for Dr.Steipe's function dbSanitizeSequence()
Usage
1
sanitizeSeq(s)
Arguments
s
chr DNA sequence, maybe not vaild
Value
chr a valid, uppercase, DNA sequence
References
Boris Steipe BCH441 - Bioinformatics
http://steipe.biochemistry.utoronto.ca/abc/index.php/Bioinformatics_Main_Page
LoadingBFX/rsrm documentation built on Dec. 8, 2019, 8:40 a.m.
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
Description Usage Arguments Value References
Description
Remove FASTA header and all letters except A, T, C, G. This function is adapted for Dr.Steipe's function dbSanitizeSequence()
Usage
1 | sanitizeSeq(s)
|
Arguments
s |
chr DNA sequence, maybe not vaild |
Value
chr a valid, uppercase, DNA sequence
References
Boris Steipe BCH441 - Bioinformatics http://steipe.biochemistry.utoronto.ca/abc/index.php/Bioinformatics_Main_Page
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
Embedding an R snippet on your website
Add the following code to your website.
For more information on customizing the embed code, read Embedding Snippets.