Files in MPIIComputationalEpigenetics/muPipeR
muPipeR
.gitignore
DESCRIPTION
NAMESPACE
R/CommandR-class.R
R/CommandRsge-class.R
R/CommandRslurm-class.R
R/CommandRsystem-class.R
R/Job-class.R
R/JobResult-class.R
R/PipR-class.R
R/classDefs.R
R/config.R
R/parallelProcessing.R
R/utils.R
inst/extdata/examples/appendLine.sh
inst/extdata/examples/concatFiles.sh
man/CommandR-class.Rd
man/CommandRsge-class.Rd
man/CommandRslurm-class.Rd
man/CommandRsystem-class.Rd
man/Job-class.Rd
man/JobResult-class.Rd
man/PipR-class.Rd
man/addStep-PipR-method.Rd
man/changePipeDir-PipR-method.Rd
man/checkErrorsInLogFiles.Rd
man/cleanup-PipR-method.Rd
man/exec-CommandR-method.Rd
man/exec-CommandRsge-method.Rd
man/exec-CommandRslurm-method.Rd
man/exec-CommandRsystem-method.Rd
man/getArgs-Job-method.Rd
man/getCallString-Job-method.Rd
man/getCmd-Job-method.Rd
man/getCommand-JobResult-method.Rd
man/getDepJobs-Job-method.Rd
man/getDir-PipR-method.Rd
man/getErr-JobResult-method.Rd
man/getGraph-PipR-method.Rd
man/getHashString.Rd
man/getId-Job-method.Rd
man/getLogDir-CommandR-method.Rd
man/getOut-JobResult-method.Rd
man/getStatus-JobResult-method.Rd
man/getSteps-PipR-method.Rd
man/initialize-CommandR-method.Rd
man/initializePipeDir-PipR-method.Rd
man/lapplyExec-CommandR-method.Rd
man/lexec-CommandR-methods.Rd
man/lexec-CommandRsge-method.Rd
man/lexec-CommandRslurm-method.Rd
man/lexec-CommandRsystem-method.Rd
man/parallel.getNumWorkers.Rd
man/parallel.isEnabled.Rd
man/parallel.setup.Rd
man/parallel.teardown.Rd
man/plotGraph-PipR-method.Rd
man/resetStep-PipR-method.Rd
man/run-PipR-method.Rd
vignettes/muPipeR.Rmd
vignettes/muPipeR.html
