addStep,PipR-method | R Documentation |
Add an analysis step to the pipeline
## S4 method for signature 'PipR' addStep(object, name, cmd, args = NULL, parents = character())
object |
|
name |
A name for the analysis step. will be used as an identifier |
cmd |
Command(s)/Tool(s) pertaining to the analysis step as character vector.
If the vector is of length 1 (single string), the command will be recycled
for all |
args |
Command/Tool arguments pertaining to the analysis step as list of character vectors. There should be one list element for each command. |
parents |
Character vector specifying the names of other analysis steps the new step depends on. These steps must already be in the pipeline object. |
The new analysis step will be registered and scheduled for running using
the run,PipR-method
command.
the modified pipeline object containing the added analysis step
Fabian Mueller
Add the following code to your website.
For more information on customizing the embed code, read Embedding Snippets.