getSteps-PipR-method: getSteps-methods

getSteps,PipR-methodR Documentation

getSteps-methods

Description

Return the names of pipeline steps

Usage

## S4 method for signature 'PipR'
getSteps(object, status = "all", graphOrder = FALSE)

Arguments

object

PipR object

status

Optionally only include complete or incomplete steps in the output. Possible values are "all", "complete", "incomplete".

graphOrder

Logical indicating whether the steps should be returned in graph order, i.e. in the order of a DFS in the pipeline graph.

Value

Character vector of pipeline step names.

Author(s)

Fabian Mueller


MPIIComputationalEpigenetics/muPipeR documentation built on Oct. 18, 2022, 2:35 a.m.