Man pages for MPIIComputationalEpigenetics/muPipeR
muPipeR

addStep-PipR-method	addStep-methods
changePipeDir-PipR-method	changePipeDir-methods
checkErrorsInLogFiles	checkErrorsInLogFiles
cleanup-PipR-method	cleanup-methods
CommandR-class	CommandR
CommandRsge-class	CommandRsge Class
CommandRslurm-class	CommandRslurm Class
CommandRsystem-class	CommandRsystem Class
exec-CommandR-method	exec-methods
exec-CommandRsge-method	exec-methods
exec-CommandRslurm-method	exec-methods
exec-CommandRsystem-method	exec-methods
getArgs-Job-method	getArgs-methods
getCallString-Job-method	getCallString-methods
getCmd-Job-method	getCmd-methods
getCommand-JobResult-method	getCommand-methods
getDepJobs-Job-method	getDepJobs-methods
getDir-PipR-method	getDir-methods
getErr-JobResult-method	getErr-methods
getGraph-PipR-method	getGraph-methods
getHashString	getHashString
getId-Job-method	getId-methods
getLogDir-CommandR-method	getLogDir-methods
getOut-JobResult-method	getOut-methods
getStatus-JobResult-method	getStatus-methods
getSteps-PipR-method	getSteps-methods
initialize-CommandR-method	initialize.CommandR
initializePipeDir-PipR-method	initializePipeDir-methods
Job-class	Job
JobResult-class	JobResult
lapplyExec-CommandR-method	lapplyExec-methods
lexec-CommandR-methods	lexec-methods
lexec-CommandRsge-method	lexec-methods
lexec-CommandRslurm-method	lexec-methods
lexec-CommandRsystem-method	lexec-methods
parallel.getNumWorkers	parallel.getNumWorkers
parallel.isEnabled	parallel.isEnabled
parallel.setup	parallel.setup
parallel.teardown	parallel.teardown
PipR-class	PipR
plotGraph-PipR-method	plotGraph-methods
resetStep-PipR-method	resetStep-methods
run-PipR-method	run-methods