transform_betas: Transform betas
In MRCIEU/mrQC: CheckSumStats
transform_betas R Documentation
Transform betas
Description
Transform betas from a linear model to a log odds ratio scale. Assumes betas have been derived from a linear model of case-control status regressed on SNP genotype (additively coded).
Usage
transform_betas(dat = NULL, effect = "lnor", effect.se = "se")
Arguments
dat
the target dataset
rsids
effect
the column containing the beta. We wish to transform this to a log odds ratio scale
effect.se
standard error for the beta
Value
data frame
MRCIEU/mrQC documentation built on May 6, 2023, 1:40 p.m.
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| transform_betas | R Documentation |
Transform betas
Description
Transform betas from a linear model to a log odds ratio scale. Assumes betas have been derived from a linear model of case-control status regressed on SNP genotype (additively coded).
Usage
transform_betas(dat = NULL, effect = "lnor", effect.se = "se")
Arguments
dat |
the target dataset rsids |
effect |
the column containing the beta. We wish to transform this to a log odds ratio scale |
effect.se |
standard error for the beta |
Value
data frame
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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