browseInteractions: Browse genomic interactions

In MalteThodberg/tidyGenomeBrowser: Easy Genome Browser Figures Using R / Bioconductor

Browse genomic interactions

Description

Genome browser-type plot of genomic interactions, e.g. BEDPE-like data.

Usage

browseInteractions(object, ...)

## S4 method for signature 'ANY'
browseInteractions(object)

## S4 method for signature 'GInteractions'
browseInteractions(object, region = NULL, plot = TRUE)

## S4 method for signature 'data.frame'
browseInteractions(object, region)

Arguments

object	GInteractions: Genomic interactions.
...	not currently used.
region	GRanges or NULL: Plotting window.
plot	logical: Whether to produce a plot or return the plot data.

Value

ggplot or data.frame.

Examples

# TBA

MalteThodberg/tidyGenomeBrowser documentation built on Feb. 21, 2024, 8:39 p.m.