browseTranscripts: Browse transcript structures

In MalteThodberg/tidyGenomeBrowser: Easy Genome Browser Figures Using R / Bioconductor

Browse transcript structures

Description

Genome browser-type plot of transcript-structures (intron/exon/CDS), e.g. GTF-like data.

Usage

browseTranscripts(object, ...)

## S4 method for signature 'ANY'
browseTranscripts(object)

## S4 method for signature 'GRangesList'
browseTranscripts(object, region = NULL, CDS = NULL, plot = TRUE)

## S4 method for signature 'data.frame'
browseTranscripts(object, region)

Arguments

object	GRangesList: Transcripts-per-gene.
...	not currently used.
region	GRanges or NULL: Plotting window.
CDS	GRangesList: CDS-per-gene.
plot	logical: Whether to produce a plot or return the plot data.

Value

ggplot or data.frame.

Examples

# TBA

MalteThodberg/tidyGenomeBrowser documentation built on Feb. 21, 2024, 8:39 p.m.