Description Objects from the Class Slots Extends Methods Author(s) Examples

This class holds the results of NONMEM problems that both simulate data and fit the model during each simulation (that is, models with a $SIM statement in the control file but no "ONLY" keyword).

Objects can be created by calls of the form `new("NMSimModel", ...)`

. There is also an internal constructor
`NMSimModel`

, but it is not meant to be called directly. Most of the time, instances of this class will be
created when importing a run via `importNm`

.

`numSimulations`

:Object of class

`"numeric"`

. Number of simulations generated`thetaFinal`

:Object of class

`"matrix"`

. Final estimates of the "thetas", stored as a matrix with one row for each simulation`objectiveFinal`

:Object of class

`"numeric"`

. Vector of final values of the objective functions.`omegaFinal`

:Object of class

`"array"`

. Final estimates of the "omegas", stored as a 3-d array with one matrix for each simulation.`sigmaFinal`

:Object of class

`"array"`

. Final estimates of the "sigmas", stored as a 3-d array with one matrix for each simulation.`thetaInitial`

:Object of class

`"vector"`

. Initial values of thetas`omegaInitial`

:Object of class

`"matrix"`

. Initial values of omegas`sigmaInitial`

:Object of class

`"matrix"`

. Initial values of sigmas`seeds`

:Object of class

`"numeric"`

. Values of seeds used for random-number generation

Class `"NMProblem"`

, directly.

- getObjective
`signature(obj = "NMSimModel")`

: ...- getOmegas
`signature(obj = "NMSimModel")`

: Retrieves the omega estimates for the simulation number- getSigmas
`signature(obj = "NMSimModel")`

: Retrieves the sigma estimates for the simulation number- getThetas
`signature(obj = "NMSimModel")`

: Retrieves the theta estimates for the simulation number- addDerivedCategorical
`signature(obj = "NMSimModel")`

: Create user-defined categorical variables- imposeCategoryFormat
`signature(obj = "NMSimModel")`

: Coerces variables to categories- nmData
`signature(obj = "NMSimModel")`

: Extracts NONMEM data. A parameter stackInput is also available. If TRUE, will cause input to be "stacked" enough times that it matches the size of the output.- show
`signature(object = "NMSimModel")`

: ...- getSimInfo
`signature(obj = "NMSimModel")`

: Get Simulation Information

Mango Solutions

1 | ```
showClass("NMSimModel")
``` |

MangoTheCat/RNMImport documentation built on Aug. 5, 2018, 4:09 p.m.

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