MarianSchoen/DMC: Comparison of different Deconvolution Models in several scenarios

Deconvolute given RNA-Seq bulks using scRNA-Seq profiles and a list of models. Models must be provided as functions from the user. In addition, perform different benchmarks by deconvolving artificial bulks created from single-cell data, including deconvolution with different gene sets, dependency on training data and simulated subtypes. The user has the option to exclude cell types from the reference or the simulated bulks.

install.packages("remotes")
remotes::install_github("MarianSchoen/DMC")