bootstrap_bulks: this functions performs bootstrapping on the real bulk...
In MarianSchoen/DMC: Comparison of different Deconvolution Models in several scenarios
View source: R/bootstrap_bulks.R
bootstrap_bulks R Documentation
this functions performs bootstrapping on the real bulk deconvolution results
to determine the stability of the deconvolution results
Description
this functions performs bootstrapping on the real bulk deconvolution results
to determine the stability of the deconvolution results
Usage
bootstrap_bulks(props)
Arguments
props
list with two entries:
1) est - matrix containing the estimated fractions of cell types
within the bulks (cell type x bulk)
2) real - matrix containing the true fractions of cell types
within the bulks (cell type x bulk)
Value
matrix containing all bootstrap runs with columns
'algorithm', 'cell_type' and 'score'
MarianSchoen/DMC documentation built on Aug. 2, 2022, 3:05 p.m.
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View source: R/bootstrap_bulks.R
| bootstrap_bulks | R Documentation |
this functions performs bootstrapping on the real bulk deconvolution results to determine the stability of the deconvolution results
Description
this functions performs bootstrapping on the real bulk deconvolution results to determine the stability of the deconvolution results
Usage
bootstrap_bulks(props)
Arguments
props |
list with two entries: 1) est - matrix containing the estimated fractions of cell types within the bulks (cell type x bulk) 2) real - matrix containing the true fractions of cell types within the bulks (cell type x bulk) |
Value
matrix containing all bootstrap runs with columns 'algorithm', 'cell_type' and 'score'
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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