render_results: render markdown report for data produced by benchmark

In MarianSchoen/DMC: Comparison of different Deconvolution Models in several scenarios

render markdown report for data produced by benchmark

Description

render markdown report for data produced by benchmark

Usage

render_results(
  temp.dir,
  benchmark.name = "",
  celltype.col = "cell_type",
  celltype.order = NULL,
  celltype.order.sim = NULL
)

Arguments

temp.dir	directory containing the benchmark data. Usually paste(temp.dir,"/",benchmark.name,sep=""), where temp.dir and benchmark.name are parameters of benchmark.
benchmark.name	string, name of the benchmark to be included in report filename
celltype.col	string, name of the column in sc.pheno that contains cell type information; default "cell_type"
celltype.order	character vector, order of celltypes in real data plot
celltype.order.sim	character vector, order of celltypes in simulated data plot

MarianSchoen/DMC documentation built on Aug. 2, 2022, 3:05 p.m.