A: Allelic Diversity
In MarianaLag/Mlag: Tools Related to the Spatial Analysis of Genetic Marker Data

This function returns the number of unique, non-NA alleles, in a sample.

1	A(x, min_freq = 0, loci = NULL, ...)

`x`	A set of `locus` objects
`min_freq`	The minimum frequency of allele to consider (default=0)
`loci`	A list of loci to use (if a `data.frame`), if not given then all will be considered.
`...`	Ignored

The number of alleles that have min_freq frequency.

1
2
3

loci <- c( locus(1:2), locus(c(1,1)), locus(c(2,2)), locus(2:3) )
A(loci)
A(loci, min_freq=0.13)

MarianaLag/Mlag documentation built on Feb. 13, 2020, 12:30 a.m.

MarianaLag/Mlag index

README.md

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