Ae: Effective Allelic Diversity

Description Usage Arguments Value Examples

View source: R/ae.R

Description

This function returns the effective number of alleles in a sample.

Usage

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Ae(x, loci = NULL, ...)

Arguments

x

A set of locus objects either as a vector or within a data.frame.

loci

A list of loci to use if this is a data.frame (default is NULL). If missing, all loci are used.

...

Ignored

Value

The effective number of alleles either as a numeric value or as a data.frame if multiple loci are passed.

Examples

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locus <- c( locus(1:2), locus(c(1,1)), locus(c(2,2)), locus(2:3) )
Ae(locus)
locus2 <- c( locus(1:2), locus(c(1,1)), locus(c(2,2)), locus(2:3) )
df <- data.frame( locus, locus2 )
Ae(df)

MarianaLag/Mlag documentation built on Feb. 13, 2020, 12:30 a.m.