MarioniLab/scran: Methods for Single-Cell RNA-Seq Data Analysis
Version 1.7.8

Implements a variety of low-level analyses of single-cell RNA-seq data. Methods are provided for normalization of cell-specific biases, assignment of cell cycle phase, and detection of highly variable and significantly correlated genes.

Getting started

Package details

AuthorAaron Lun [aut, cre], Karsten Bach [aut], Jong Kyoung Kim [ctb], Antonio Scialdone [ctb], Laleh Haghverdi [ctb]
Bioconductor views BatchEffect GeneExpression Normalization RNASeq Sequencing SingleCell Software Transcriptomics Visualization
MaintainerAaron Lun <[email protected]>
LicenseGPL-3
Version1.7.8
Package repositoryView on GitHub
Installation Install the latest version of this package by entering the following in R:
install.packages("devtools")
library(devtools)
install_github("MarioniLab/scran")
MarioniLab/scran documentation built on Dec. 17, 2017, 11:40 p.m.