MarioniLab/scran: Methods for Single-Cell RNA-Seq Data Analysis

Implements miscellaneous functions for interpretation of single-cell RNA-seq data. Methods are provided for assignment of cell cycle phase, detection of highly variable and significantly correlated genes, identification of marker genes, and other common tasks in routine single-cell analysis workflows.

Getting started

Package details

Bioconductor views Clustering GeneExpression ImmunoOncology Normalization RNASeq Sequencing SingleCell Software Transcriptomics
Maintainer
LicenseGPL-3
Version1.21.1
Package repositoryView on GitHub
Installation Install the latest version of this package by entering the following in R:
install.packages("remotes")
remotes::install_github("MarioniLab/scran")
MarioniLab/scran documentation built on May 29, 2021, 7:36 a.m.