createSummarizedExperiment: This function creates a summarized experiment object from a...
In MassDynamics/MassExpression: MassExpression
View source: R/createSummarizedExperiment.R
createSummarizedExperiment R Documentation
This function creates a summarized experiment object from a protein intensity table and experiment design.
Description
This function creates a summarized experiment object from a protein intensity table and experiment design.
Usage
createSummarizedExperiment(experimentDesign, proteinIntensities, listMetadata)
Arguments
experimentDesign
data.frame. Experiment design provided in input by the user. Required columsn are: 'SampleName' and 'Condition'.
proteinIntensities
data.frame. Wide matrix of intensities. Rows are proteins and columns are SampleNames. Required column: 'ProteinId'.
listMetadata
list of metadata: 'Species', 'LabellingMethod', 'NormalisationAppliedToAssay'.
Value
A SummarizedExperiment object
MassDynamics/MassExpression documentation built on May 7, 2023, 11:29 a.m.
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
View source: R/createSummarizedExperiment.R
| createSummarizedExperiment | R Documentation |
This function creates a summarized experiment object from a protein intensity table and experiment design.
Description
This function creates a summarized experiment object from a protein intensity table and experiment design.
Usage
createSummarizedExperiment(experimentDesign, proteinIntensities, listMetadata)
Arguments
experimentDesign |
data.frame. Experiment design provided in input by the user. Required columsn are: 'SampleName' and 'Condition'. |
proteinIntensities |
data.frame. Wide matrix of intensities. Rows are proteins and columns are SampleNames. Required column: 'ProteinId'. |
listMetadata |
list of metadata: 'Species', 'LabellingMethod', 'NormalisationAppliedToAssay'. |
Value
A SummarizedExperiment object
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
Embedding an R snippet on your website
Add the following code to your website.
For more information on customizing the embed code, read Embedding Snippets.