API for Maxim-Ivanov/TranscriptomeReconstructoR
Data-driven Annotation of the Transcriptome

Global functions
adjust_exons_of_long_reads Man page Source code
adjust_splice_sites Source code
call_TCs Man page Source code
call_transcribed_intervals Man page Source code
call_transcripts_and_genes Man page Source code
detect_alignment_errors Man page Source code
extend_called_transcripts Source code
extend_long_reads_to_TSS_and_PAS Man page Source code
flip_strand_info Man page Source code
load_BAM_files Man page Source code
merge_GRanges Man page Source code
process_nascent_intervals Man page
refine_transcripts_by_annotation Man page Source code
save_GRanges_as_bedGraph Man page Source code
summarize_grl_width Source code
update_tx_id Source code
write_grl_as_bed12 Man page Source code
Maxim-Ivanov/TranscriptomeReconstructoR documentation built on Jan. 28, 2021, 11:47 a.m.