getCovFromBam: Function to create TCRA coverage file from bams
In McGranahanLab/TcellExTRECT: T cell Exome TREC Tool
View source: R/getCovFromBam.R
getCovFromBam R Documentation
Function to create TCRA coverage file from bams
Description
Function to create TCRA coverage file from bams
Usage
getCovFromBam(bamPath, outPath, vdj.seg)
Arguments
bamPath
Path to bam file
outPath
Path to output directory
vdj.seg
Location of TCRA file
McGranahanLab/TcellExTRECT documentation built on Jan. 10, 2025, 11:04 p.m.
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View source: R/getCovFromBam.R
| getCovFromBam | R Documentation |
Function to create TCRA coverage file from bams
Description
Function to create TCRA coverage file from bams
Usage
getCovFromBam(bamPath, outPath, vdj.seg)
Arguments
bamPath |
Path to bam file |
outPath |
Path to output directory |
vdj.seg |
Location of TCRA file |
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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