Counting label transitions in phylogenetic stochastic mapping

Global functions | |
---|---|

BM_calibrated_test | Source code |

BM_positive_negative_rate | Source code |

Browntip_simu | Source code |

CTMC.line.sample | Man page Source code Source code |

CTMC.positive.negative.rate | Source code |

CTMC.tree | Source code Source code |

CTMC_BM_Connect | Source code |

CTMCprob1 | Source code Source code |

CTMCprob2 | Source code Source code |

MLEphy | Man page Source code Source code |

MLEphy.log | Man page Source code |

MLphy | Source code Source code |

MLphy2 | Source code Source code Source code |

OUbridge | Man page Source code |

OUpath | Man page Source code |

TwoStatePhyloLikelihood1 | Source code |

TwoStatePhyloLikelihood2 | Source code |

bayesf | Source code |

bf_v | Source code |

bfk | Source code |

brown_crossing_sample | Source code |

brown_tree_prior2 | Man page Source code |

brown_tree_prior_data | Source code |

brown_tree_prior_grid | Man page Source code |

brown_tree_prior_node | Man page Source code |

brown_tree_prior_node_cpp | Source code |

brownian_crossing_post2 | Man page Source code |

brownian_crossing_post3 | Man page Source code |

brpr | Source code |

ckprpostbf | Source code |

crossing | Man page Source code |

crossing_brownbridge | Source code |

exps | Source code |

fastpost2 | Man page Source code |

fills_in | Man page Source code |

fills_in_cpp | Source code |

fills_in_mat | Source code |

fitdisctmc | Source code |

get_prior_count_mx | Source code |

getcrossingnum | Source code |

getneighbor_cpp | Source code |

getprs | Source code Source code |

hello | Man page |

lines.roc | Source code |

mid.tree | Source code |

mx_counts | Man page Source code |

onUnload | Source code |

plot.roc | Source code |

positive_negative | Source code |

positive_negative_rate | Source code |

positive_negative_rate_parallel | Source code |

post_test_epsilonx0 | Source code Source code |

posterior_update | Source code |

pr_test_epsilonx0 | Source code Source code |

pr_test_epsilonx0_2 | Source code Source code |

qtile | Source code Source code |

qtile2 | Source code |

roc.point.specify | Source code |

tree.plot | Source code Source code |

trnorm0 | Source code |

twoStateRateMatrix | Source code |

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