README.md

In MingweiWilliamTang/BMIthreshCount: Counting label transitions in phylogenetic stochastic mapping

BMIthreshCount

BMIthreshCount is a R package targeting at counting and inferring binary trait transitions in evolution.

installation

If you don't have devtools package install, first install devtools package by running

install_github("vnminin/indorigin") 

After having devtools installed, library devtool and install the package via github

install_github("MingweiWilliamTang/BMIthreshCount",build_vignettes=TRUE) 

Building vignettes will take some extra time. If you don't want vignettes, you can set build_vignettes=FALSE

get started with the package

Load the package and open the package vignette:

library(BMIthreshCount) vignette("BMIthresh") There will be examples on some of the key functions in BMIthreshCount package. Also, if you have any question of how to use some function, use help(functionname).

Have fun with BMIthreshCount

MingweiWilliamTang/BMIthreshCount documentation built on May 7, 2019, 4:57 p.m.