brownian_crossing_post2: Posterior probability for the number of crossing given tip...

In MingweiWilliamTang/BMIthreshCount: Counting label transitions in phylogenetic stochastic mapping

Description

Posterior probability for the number of crossing given tip binary observation

Usage

brownian_crossing_post2(phy, d, thed, epsilon, root.prior, ngen = 20000,
  burnin = 10000, thin = 5, k = 0, less = F)

Arguments

phy	A phylo type object.
d	the discrete observation on the tip of the tree.
epsilon	the radius of the interval for crossing
root.prior	A numeric vector with two values, which is the mean and variance for the prior distribution (normal) for the root liability.

Value

A vector associate with the posterior probabililty for the number of upcrossing

MingweiWilliamTang/BMIthreshCount documentation built on May 7, 2019, 4:57 p.m.