generate_table: generate statistical table

In MoseleyBioinformaticsLab/categoryCompare2: Meta-Analysis of High-Throughput Experiments Using Feature Annotations

generate statistical table

Description

given a combined_enrichment object, get out the data.frame either for investigation or to add data to the cc_graph.

Usage

generate_table(comb_enrichment, link_type = "explicit")

## S4 method for signature 'combined_enrichment'
generate_table(comb_enrichment, link_type = "explicit")

Arguments

comb_enrichment	the combined_enrichment object
link_type	should their be an "explicit" link (see details)

Details

the link_type controls whether to create an "explicit" link that is actually a column in the data.frame, or create an "implicit" html link that is part of the @name column in the returned data.frame. Useful if you are embedding the data.frame in an html report.

Value

data.frame

MoseleyBioinformaticsLab/categoryCompare2 documentation built on Dec. 18, 2024, 7:29 p.m.