R/RcppExports.R

Defines functions mesh_area neighbour_list ind2coords coords2ind graph_tfce graph_tfce_wqu replaceColours replaceValues get_volume rcpp_minc_apply atlas_get_all count_labels anat_summary

# Generated by using Rcpp::compileAttributes() -> do not edit by hand
# Generator token: 10BE3573-1514-4C36-9D1C-5A225CD40393

anat_summary <- function(filenames, atlas, method) {
    .Call(`_RMINC_anat_summary`, filenames, atlas, method)
}

count_labels <- function(filenames) {
    .Call(`_RMINC_count_labels`, filenames)
}

atlas_get_all <- function(filenames, atlas, method) {
    .Call(`_RMINC_atlas_get_all`, filenames, atlas, method)
}

rcpp_minc_apply <- function(filenames, use_mask, mask, mask_lower_val, mask_upper_val, value_for_mask, filter_masked, slab_sizes, fun, args) {
    .Call(`_RMINC_rcpp_minc_apply`, filenames, use_mask, mask, mask_lower_val, mask_upper_val, value_for_mask, filter_masked, slab_sizes, fun, args)
}

get_volume <- function(filename) {
    .Call(`_RMINC_get_volume`, filename)
}

replaceValues <- function(labelVol, out, labels, values) {
    invisible(.Call(`_RMINC_replaceValues`, labelVol, out, labels, values))
}

replaceColours <- function(labelVol, out, labels, values) {
    invisible(.Call(`_RMINC_replaceColours`, labelVol, out, labels, values))
}

graph_tfce_wqu <- function(map, adjacencies, E, H, nsteps, weights) {
    .Call(`_RMINC_graph_tfce_wqu`, map, adjacencies, E, H, nsteps, weights)
}

graph_tfce <- function(map, adjacencies, E, H, nsteps, weights) {
    .Call(`_RMINC_graph_tfce`, map, adjacencies, E, H, nsteps, weights)
}

coords2ind <- function(i, j, k, d1, d2, d3) {
    .Call(`_RMINC_coords2ind`, i, j, k, d1, d2, d3)
}

ind2coords <- function(v, d1, d2, d3) {
    .Call(`_RMINC_ind2coords`, v, d1, d2, d3)
}

neighbour_list <- function(x, y, z, n) {
    .Call(`_RMINC_neighbour_list`, x, y, z, n)
}

mesh_area <- function(vertices, triangles) {
    .Call(`_RMINC_mesh_area`, vertices, triangles)
}
Mouse-Imaging-Centre/RMINC documentation built on Nov. 12, 2022, 1:50 p.m.