balanceSamples: Subsample cells in seurat object to be balanced...

In NMikolajewicz/scMiko: scRNAseq analysis functions. Developed using Seurat framework.

Subsample cells in seurat object to be balanced (sample-size-wise) across conditions.

Description

Subsample cells in seurat object to be balanced (sample-size-wise) across conditions.

Usage

balanceSamples(object, group, balance.size = NA)

Arguments

object	Seurat Object
group	Character specifying group (i.e., metadata field) to sub-sample within.
balance.size	Numeric. Target sub sample size for each condition. If target exceeds number of available cells, only available cells are included. If unspecified, smallest-sized group is set as target (Default).

Value

Seurat object

Author(s)

Nicholas Mikolajewicz

Examples

so.query <- balanceSamples(object = so.query, group = "Barcode")

NMikolajewicz/scMiko documentation built on June 28, 2023, 1:41 p.m.