In NOAA-EDAB/neusCatch: Multispecies length expansion of commercial catch

knitr::opts_chunk$set(
  collapse = TRUE,
  comment = "#>"
)
library(magrittr)

Logfile

Several items are printed to the log file

• Species name
• The functional call made to aggregate_landings
• Table of landings by gear
• Table of landings by market category
• Decisions relating to market category aggregations whether due to insufficient samples or due to similar length distributions.
• Decisions relating to how length samples are used/borrowed from other time periods

Below is a sample from a logfile:

knitr::include_graphics("figures/sampleLogFile.PNG")

Plots

A subset of the full suite of plots are shown below

Landings by NEGEAR

knitr::include_graphics("figures/market_category_lengths_by_gear.png")

Landings by MARKET_CODE

knitr::include_graphics("figures/landings_by_market_cat.png")

Number of length samples by QTR

knitr::include_graphics("figures/length_samples.png")

Number of samples by QTR/market category for NEGEAR 50

knitr::include_graphics("figures/market_category_qtr_landings_050.png")

Market category lengths

knitr::include_graphics("figures/market_category_lengths.png")

Market category landings

knitr::include_graphics("figures/market_category_landings.png")

Length Weight data

knitr::include_graphics("figures/length_weight_relationship_HADDOCK.png")

NOAA-EDAB/neusCatch documentation built on Jan. 23, 2025, 3:29 a.m.