OHDSI/CohortMethod
New-User Cohort Method with Large Scale Propensity and Outcome Models

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Vignettes
Functions
241
Source code
54
Man pages
78
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OHDSI/CohortMethod: New-User Cohort Method with Large Scale Propensity and Outcome Models
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API

API for OHDSI/CohortMethod
New-User Cohort Method with Large Scale Propensity and Outcome Models

Global functions
.assertCovariateId Source code
.createBalanceFileName Source code
.createCohortMethodDataFileName Source code
.createFilterForBalanceFileName Source code
.createOutcomeModelFileName Source code
.createPrefilteredCovariatesFileName Source code
.createPsFileName Source code
.createPsOutcomeFileName Source code
.createStratifiedPopFileName Source code
.createStudyPopulationFileName Source code
.createsharedBalanceFileName Source code
.f Source code
.truncRight Source code
CohortMethod Man page
CohortMethod-package Man page
CohortMethodData Man page
CohortMethodData-class Man page
addPsToStudyPopForSubset Source code
addPsToStudyPopulation Source code
adjustedKm Man page Source code
applyTrimMatchStratify Source code
aucWithCi Source code
aucWithoutCi Source code
calibrateEstimates Source code
calibrateGroup Source code
checkCmInstallation Man page Source code
coef.OutcomeModel Source code
cohortMethodDataSimulationProfile Man page
computeCovariateBalance Man page Source code
computeEquipoise Man page Source code
computeIptw Source code
computeMdrr Man page Source code
computeMdrrFromAggregateStats Source code
computeMeansPerGroup Source code
computePreferenceScore Source code
computePsAuc Man page Source code
confint.OutcomeModel Source code
countPreSample Source code
createCmAnalysis Man page Source code
createCmDiagnosticThresholds Man page Source code
createCmTable1 Man page Source code
createCohortMethodDataSimulationProfile Man page Source code
createComputeCovariateBalanceArgs Man page Source code
createCreatePsArgs Man page Source code
createCreateStudyPopulationArgs Man page Source code
createDefaultMultiThreadingSettings Man page Source code
createEmptyResult Source code
createFitOutcomeModelArgs Man page Source code
createGetDbCohortMethodDataArgs Man page Source code
createMatchOnPsAndCovariatesArgs Man page Source code
createMatchOnPsArgs Man page Source code
createMultiThreadingSettings Man page Source code
createOutcome Man page Source code
createPs Man page Source code
createReferenceTable Source code
createResultsDataModel Man page Source code
createStratifyByPsAndCovariatesArgs Man page Source code
createStratifyByPsArgs Man page Source code
createStudyPopulation Man page Source code
createSubgroupCounts Source code
createTargetComparatorOutcomes Man page Source code
createTrimByIptwArgs Man page Source code
createTrimByPsArgs Man page Source code
createTrimByPsToEquipoiseArgs Man page Source code
createTruncateIptwArgs Man page Source code
dateCheck Source code
doComputeBalance Source code
doComputeSharedBalance Source code
doCreateCmDataObject Source code
doCreateStudyPopObject Source code
doFilterForCovariateBalance Source code
doFitOutcomeModel Source code
doFitOutcomeModelPlus Source code
doFitPsModel Source code
doFitSharedPsModel Source code
doPrefilterCovariates Source code
doTrimMatchStratify Source code
downSample Source code
drawAttritionDiagram Man page Source code
enforceMinCellValue Source code
ensureInstalled Source code
exportAttrition Source code
exportCmFollowUpDist Source code
exportCmInteractionResults Source code
exportCohortMethodAnalyses Source code
exportCohortMethodResults Source code
exportCovariateBalance Source code
exportDiagnosticsSummary Source code
exportFromCohortMethodData Source code
exportKaplanMeier Source code
exportLikelihoodProfiles Source code
exportPreferenceScoreDistribution Source code
exportPropensityModel Source code
exportSharedCovariateBalance Source code
exportTargetComparatorOutcomes Source code
exportToCsv Man page Source code
fastDuplicated Source code
filterAndTidyCovariates Source code
filterCovariates Source code
fitOutcomeModel Man page Source code
getAttritionTable Man page Source code
getCohortMethodData Source code
getCounts Source code
getDataMigrator Man page Source code
getDbCohortMethodData Man page Source code
getDefaultCmTable1Specifications Man page Source code
getFileReference Man page Source code
getFollowUpDistribution Man page Source code
getGeneralizabilityTable Man page Source code
getInformativePopulation Source code
getInteractionResultsSummary Man page Source code
getOutcomeCounts Source code
getOutcomeModel Man page Source code
getPs Source code
getPsModel Man page Source code
getResultsDataModelSpecifications Man page Source code
getResultsSummary Man page Source code
getTimeAtRisk Source code
handleCohortCovariateBuilders Source code
insertExportedResultsInSqlite Man page Source code
isCohortMethodData Man page Source code
launchResultsViewer Man page Source code
launchResultsViewerUsingSqlite Man page Source code
loadCmAnalysisList Man page Source code
loadCohortMethodData Man page Source code
loadTargetComparatorOutcomesList Man page Source code
logit Source code
matchOnPs Man page Source code
matchOnPsAndCovariates Man page Source code
matchPsInternal Source code
mergeCovariatesWithPs Source code
migrateDataModel Man page Source code
modelTypeToCyclopsModelType Source code
nrow_temp Source code
plotCovariateBalanceOfTopVariables Man page Source code
plotCovariateBalanceScatterPlot Man page Source code
plotCovariatePrevalence Man page Source code
plotFollowUpDistribution Man page Source code
plotKaplanMeier Man page Source code
plotPs Man page Source code
plotTimeToEvent Man page Source code
prepareKaplanMeier Source code
prepareKm Source code
print.OutcomeModel Source code
print.summary.CohortMethodData Source code
runCmAnalyses Man page Source code
sampleCohorts Source code
sampleCohortsAndromeda Source code
sampleSingleCohort Source code
saveCmAnalysisList Man page Source code
saveCohortMethodData Man page Source code
saveTargetComparatorOutcomesList Man page Source code
show,CohortMethodData-method Man page
simulateCohortMethodData Man page Source code
stratifyByPs Man page Source code
stratifyByPsAndCovariates Man page Source code
summarizeResults Source code
summary,CohortMethodData-method Man page
tidyBalance Source code
trimByIptw Man page Source code
trimByPs Man page Source code
trimByPsToEquipoise Man page Source code
truncateIptw Man page Source code
uploadExportedResults Man page Source code
uploadResults Man page Source code
writeToCsv Source code
OHDSI/CohortMethod documentation built on Feb. 9, 2024, 9:01 a.m.

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