Files in OHDSI/EvidenceSynthesis

Synthesizing Causal Evidence in a Distributed Research Network

.Rbuildignore

.classpath

.github/workflows/R_CMD_check_Hades.yaml

.github/workflows/R_CMD_check_main_weekly.yaml

.gitignore

.project

CRAN-SUBMISSION

DESCRIPTION

EvidenceSynthesis.Rproj

NAMESPACE

NEWS.md R/BayesianBiasCorrection.R R/BayesianMetaAnalysis.R R/BayesianSynthesis.R R/CohortMethod.R R/EmpiricalCalibration.R R/EvidenceSynthesis.R R/FixedEffectMetaAnalysis.R R/LikelihoodApproximation.R R/MetaAnalysis.R R/Plots.R R/Simulation.R R/Utilities.R R/likelihoods-data.R README.md

_pkgdown.yml

compare_versions

cran-comments.md

data/ncLikelihoods.rda

data/ooiLikelihoods.rda

deploy.sh

docs/404.html

docs/articles/BayesianBiasCorrection.html

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docs/articles/NonNormalEffectSynthesis.html

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docs/reference/approximateHierarchicalNormalPosterior.html

docs/reference/approximateLikelihood.html

docs/reference/approximateSimplePosterior.html

docs/reference/biasCorrectionInference.html

docs/reference/computeBayesianMetaAnalysis.html

docs/reference/computeConfidenceInterval.html

docs/reference/computeFixedEffectMetaAnalysis.html

docs/reference/createSimulationSettings.html

docs/reference/customFunction.html

docs/reference/detectApproximationType.html

docs/reference/fitBiasDistribution.html

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docs/reference/simulatePopulations.html

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extras/.gitignore

extras/BayesianBiasCorrection.pdf extras/EvidenceSynthesis.pdf extras/NonNormalEffectSynthesis.pdf extras/PackageMaintenance.R extras/VideoVignette.R

extras/build.xml

extras/testRobustMetaAnalysis.R

inst/java/EvidenceSynthesis.jar

java/EvidenceSynthesis.jardesc

java/org/ohdsi/data/CoxData.java

java/org/ohdsi/data/SortedCoxData.java

java/org/ohdsi/likelihood/CoxPartialLikelihood.java

java/org/ohdsi/likelihood/EmpiricalModelLikelihood.java

java/org/ohdsi/mcmc/Analysis.java

java/org/ohdsi/mcmc/Runner.java

java/org/ohdsi/metaAnalysis/CoxDataModel.java

java/org/ohdsi/metaAnalysis/DataModel.java

java/org/ohdsi/metaAnalysis/EmpiricalDataModel.java

java/org/ohdsi/metaAnalysis/ExtendingEmpiricalDataModel.java

java/org/ohdsi/metaAnalysis/GammaOnPrecisionPrior.java

java/org/ohdsi/metaAnalysis/HalfCauchyOnStdDevPrior.java

java/org/ohdsi/metaAnalysis/HalfNormalOnStdDevPrior.java

java/org/ohdsi/metaAnalysis/JointAnalysis.java

java/org/ohdsi/metaAnalysis/LocationHyperPrior.java

java/org/ohdsi/metaAnalysis/MetaAnalysis.java

java/org/ohdsi/metaAnalysis/NormalDataModel.java

java/org/ohdsi/metaAnalysis/ParametricDataModel.java

java/org/ohdsi/metaAnalysis/RobustMetaAnalysis.java

java/org/ohdsi/metaAnalysis/ScalePrior.java

java/org/ohdsi/metaAnalysis/SkewNormalDataModel.java

java/org/ohdsi/metaAnalysis/TLocationHyperPrior.java

java/org/ohdsi/simpleDesign/ProfileHierarchicalNormalAnalysis.java

java/org/ohdsi/simpleDesign/ProfileNormalAnalysis.java

man/EvidenceSynthesis-package.Rd man/approximateHierarchicalNormalPosterior.Rd man/approximateLikelihood.Rd man/approximateSimplePosterior.Rd man/biasCorrectionInference.Rd man/computeBayesianMetaAnalysis.Rd man/computeConfidenceInterval.Rd man/computeFixedEffectMetaAnalysis.Rd man/createSimulationSettings.Rd man/customFunction.Rd man/detectApproximationType.Rd man/fitBiasDistribution.Rd man/ncLikelihoods.Rd man/ooiLikelihoods.Rd man/plotBiasCorrectionInference.Rd man/plotBiasDistribution.Rd man/plotCovariateBalances.Rd man/plotEmpiricalNulls.Rd man/plotLikelihoodFit.Rd man/plotMcmcTrace.Rd man/plotMetaAnalysisForest.Rd man/plotPerDbMcmcTrace.Rd man/plotPerDbPosterior.Rd man/plotPosterior.Rd man/plotPreparedPs.Rd man/preparePsPlot.Rd man/sequentialFitBiasDistribution.Rd man/simulatePopulations.Rd man/skewNormal.Rd man/supportsJava8.Rd tests/testthat.R

tests/testthat/resources/pooledFixedFxEstimate.rds

tests/testthat/resources/pooledRandomFxEstimate.rds

tests/testthat/resources/populations.rds

tests/testthat/test-balance.R tests/testthat/test-biasCorrection.R tests/testthat/test-java.R tests/testthat/test-llAproximations.R tests/testthat/test-nonNormalMetaAnalysis.R tests/testthat/test-plots.R tests/testthat/test-simpleBayesianModel.R

vignettes/.gitignore

vignettes/BayesianBiasCorrection.Rmd

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OHDSI/EvidenceSynthesis documentation built on May 15, 2023, 11:38 a.m.