inst/extdata/custom_go.md

In OceaneCsn/DIANE: DIANE

Expected GO annotation file

The file must be a dataframe with the gene IDs contained in the first row, and GO IDs in the second one. The order is important.

Gene IDs might be duplicated when the have several GO IDs.

A format like this is expected :

geneid  goid
Lalb_Chr00c01g0403641   GO:0005524
Lalb_Chr00c01g0403641   GO:0006464
Lalb_Chr00c01g0403661   GO:0016021
Lalb_Chr00c01g0403671   GO:0016021
Lalb_Chr00c01g0403691   GO:0016021
Lalb_Chr00c01g0403721   GO:0005634
Lalb_Chr00c01g0403721   GO:0003677
Lalb_Chr00c01g0403721   GO:0018108
Lalb_Chr00c01g0403721   GO:0046872

OceaneCsn/DIANE documentation built on Jan. 10, 2024, 6:43 p.m.