inst/extdata/pglm.md
In OceaneCsn/DIANE: DIANE
Generalized Poisson regression on a cluster of genes
The idea is to extract the importance and effect of each factor. To do so, the expression of each gene is modeled by a Poisson distribution. The log of its parameter (the expected value) is approximated by a linear combination of the factors in the experiment.
The coefficients associated to each factors are estimated to fit gene expression, and can be insightful to characterize genes behavior in a particular cluster. The model with interactions is considered automatically. If your design in not a complete crossed design, the interaction term will be null.
This should be interpreted only when a cluster is homogenous.
OceaneCsn/DIANE documentation built on Jan. 10, 2024, 6:43 p.m.
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Generalized Poisson regression on a cluster of genes
The idea is to extract the importance and effect of each factor. To do so, the expression of each gene is modeled by a Poisson distribution. The log of its parameter (the expected value) is approximated by a linear combination of the factors in the experiment.
The coefficients associated to each factors are estimated to fit gene expression, and can be insightful to characterize genes behavior in a particular cluster. The model with interactions is considered automatically. If your design in not a complete crossed design, the interaction term will be null.
This should be interpreted only when a cluster is homogenous.
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Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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