to_sce: Convert from Seurat to SingleCellExperiment
In OliverDietrich/SeuratHelper: Helper functions to assist scRNA-seq data analysis from a Seurat object
to_sce R Documentation
Convert from Seurat to SingleCellExperiment
Description
This is a conversion function between R objects from class 'Seurat' to
'SingleCellExperiment' to increase interoperability.
Usage
to_sce(object = NULL, assay = NULL)
Arguments
object
Object of class 'Seurat'
assay
Name of assay object to use for the main SingleCellExperiment
(all other assays will be stored as altExps, defaults to first assay in list)
Value
Object of class 'SingleCellExperiment'
OliverDietrich/SeuratHelper documentation built on Jan. 20, 2024, 2:57 a.m.
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| to_sce | R Documentation |
Convert from Seurat to SingleCellExperiment
Description
This is a conversion function between R objects from class 'Seurat' to 'SingleCellExperiment' to increase interoperability.
Usage
to_sce(object = NULL, assay = NULL)
Arguments
object |
Object of class 'Seurat' |
assay |
Name of assay object to use for the main SingleCellExperiment (all other assays will be stored as altExps, defaults to first assay in list) |
Value
Object of class 'SingleCellExperiment'
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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