Open-Systems-Pharmacology/OSPSuite-R
R package to manipulate OSPSuite Models

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426
Source code
172
Man pages
214
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Open-Systems-Pharmacology/OSPSuite-R: R package to manipulate OSPSuite Models
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API

API for Open-Systems-Pharmacology/OSPSuite-R
R package to manipulate OSPSuite Models

Global functions
%||% Man page
.ImporterErrorTypeToDataSetErrorType Man page
.addBranch Source code
.addMissingGroupings Man page Source code
.addPackageLibToPath Source code
.addPathToSystemPath Source code
.cleanVectorArgs Man page Source code
.convertGeneralToSpecificPlotConfiguration Man page
.createAxesLabels Man page
.createParameterRange Source code
.createSnapshotParameter Source code
.encodeUnit Man page Source code
.expandPath Man page Source code
.extractAggregatedSimulatedData Man page Source code
.extractMostFrequentUnit Man page Source code
.extractResidualsToTibble Man page Source code
.geoRange Man page
.getAllEntitiesMatching Man page Source code
.getAllEntityPathsIn Man page Source code
.getConcurrentSimulationRunnerResults Man page Source code
.getDimensionsEnum Man page Source code
.getEntity Man page Source code
.getNetTask Man page Source code
.getNetTaskFromCache Man page Source code
.getOspDimensions Man page Source code
.getOspUnits Man page Source code
.getPathToPKSimInstallDir Man page Source code
.getPathToPKSimInstallDirFromFileSystem Man page Source code
.getPathToPKSimInstallDirFromRegistry Man page Source code
.getPropertyValue Man page Source code
.getPropertyValues Man page Source code
.getQuantityDisplayPaths Man page Source code
.getSuiteVersion Source code
.getUnitsEnum Man page Source code
.homogenizePath Source code
.initPackage Man page Source code
.initializeDimensionAndUnitLists Source code
.loadDataRepositoryFromPKML Man page Source code
.makeDataFrameColumn Man page Source code
.netEnumName Man page Source code
.nextStep Source code
.normRange Man page
.onLoad Source code
.parameterValueListFrom Man page Source code
.parseDimensionsXML Man page Source code
.plotTimeProfile Source code
.removeEmptyDataFrame Man page Source code
.removeUnpairableDatasets Man page Source code
.restoreSimulationState Source code
.runSimulationsConcurrently Source code
.runSingleSimulation Source code
.savePKAnalysesToCSV Man page Source code
.savePopulationToCSV Man page Source code
.saveResultsToCSV Man page Source code
.saveSensitivityAnalysisResultsToCSV Man page Source code
.scaleQuantityValues Man page Source code
.setEndSimulationTime Man page Source code
.setQuantityValues Man page Source code
.storeSimulationState Source code
.toObjectType Man page Source code
.unify Source code
.unitConverter Man page Source code
.updatePKParameterProperties Source code
.validateDataCombinedForPlotting Source code
.validateDefaultPlotConfiguration Source code
.validateHasUnit Man page Source code
.validateScalarDataCombined Man page Source code
.xUnitConverter Source code
.yErrorUnitConverter Source code
.yUnitConverter Source code
AgingData Man page
AllMatchingMethod Man page
AllPathsInMethod Man page
ApiConfig Man page
Application Man page
Cache Man page
CompareBy Man page
Container Man page
DataAggregationMethods Man page
DataColumn Man page
DataCombined Man page
DataErrorType Man page
DataFrameNameAlreadyUsed Source code
DataImporterConfiguration Man page
DataRepository Man page
DataSet Man page
DefaultPlotConfiguration Man page
DotNetWrapper Man page
Entity Man page
Formula Man page
Gender Man page
HumanPopulation Man page
IndividualCharacteristics Man page
Interval Man page
Molecule Man page
MoleculeOntogeny Man page
MoleculeParameter Man page
ObjectBase Man page
OutputSchema Man page
OutputSelections Man page
PKParameter Man page
PKParameterSensitivity Man page
Parameter Man page
ParameterRange Man page
PlotGridConfiguration Man page
Population Man page
PopulationCharacteristics Man page
Quantity Man page
QuantityPKParameter Man page
QuantitySelection Man page
SensitivityAnalysis Man page
SensitivityAnalysisResults Man page
SensitivityAnalysisRunOptions Man page
Simulation Man page
SimulationBatch Man page
SimulationBatchOptions Man page
SimulationBatchRunValues Man page
SimulationPKAnalyses Man page
SimulationResults Man page
SimulationRunOptions Man page
SimulationSettings Man page
SnapshotParameter Man page
SolverSettings Man page
Species Man page
StandardContainer Man page
StandardOntogeny Man page
StandardPKParameter Man page
StandardPath Man page
TableFormula Man page
UserDefinedPKParameter Man page
ValuePoint Man page
addOutputInterval Man page Source code
addOutputs Man page Source code
addUserDefinedPKParameter Man page Source code
allAvailableDimensions Man page Source code
allPKParameterNames Man page Source code
calculatePKAnalyses Man page Source code
calculateResiduals Man page Source code
clearMemory Man page Source code
clearOutputIntervals Man page Source code
clearOutputs Man page Source code
convertUnits Man page Source code
createDistributions Man page Source code
createImporterConfigurationForFile Man page Source code
createIndividual Man page Source code
createIndividualCharacteristics Man page Source code
createPopulation Man page Source code
createPopulationCharacteristics Man page Source code
createSimulationBatch Man page Source code
dataSetToDataFrame Man page Source code
dataSetToTibble Man page Source code
datasetsToGroupNotFound Source code
enum Man page
enumGetKey Man page
enumGetValue Man page
enumHasKey Man page
enumKeys Man page
enumPut Man page
enumRemove Man page
enumValues Man page
errorLoadingUnitsForDimension Source code
errorOneOfNameAndPathMustBeSpecified Source code
errorWrongPopulation Source code
exportIndividualSimulations Man page Source code
exportPKAnalysesToCSV Man page Source code
exportPopulationToCSV Man page Source code
exportResultsToCSV Man page Source code
exportSensitivityAnalysisResultsToCSV Man page Source code
exportSteadyStateToXLS Man page Source code
getAllContainerPathsIn Man page Source code
getAllContainersMatching Man page Source code
getAllMoleculePathsIn Man page Source code
getAllMoleculesMatching Man page Source code
getAllObserverPathsIn Man page Source code
getAllParameterPathsIn Man page Source code
getAllParametersForSensitivityAnalysisMatching Man page Source code
getAllParametersMatching Man page Source code
getAllQuantitiesMatching Man page Source code
getAllQuantityPathsIn Man page Source code
getAllStateVariableParametersPaths Man page Source code
getAllStateVariablesPaths Man page Source code
getBaseUnit Man page Source code
getContainer Man page Source code
getDimensionByName Man page Source code
getDimensionForUnit Man page Source code
getMolecule Man page Source code
getOSPSuiteSetting Man page Source code
getOutputValues Man page Source code
getParameter Man page Source code
getParameterDisplayPaths Man page Source code
getQuantity Man page Source code
getQuantityValuesByPath Man page Source code
getSimulationTree Man page Source code
getStandardMoleculeParameters Man page Source code
getSteadyState Man page Source code
getUnitsForDimension Man page Source code
hasDimension Man page Source code
hasUnit Man page Source code
importPKAnalysesFromCSV Man page Source code
importResultsFromCSV Man page Source code
importSensitivityAnalysisResultsFromCSV Man page Source code
initPKSim Man page Source code
invalidDataType Source code
isExplicitFormulaByPath Man page Source code
linearScaleWithFoldDistance Source code
lloqOnlyScalar Source code
loadAgingDataFromCSV Man page Source code
loadDataImporterConfiguration Man page Source code
loadDataSetFromPKML Man page Source code
loadDataSetsFromExcel Man page Source code
loadPopulation Man page Source code
loadSimulation Man page Source code
logScaleNotAllowed Source code
messages Man page
noDatasetsPresentInDataCombined Source code
noDatasetsToGroup Source code
numberOfCores Source code
ospDimensions Man page
ospUnits Man page
ospsuiteSettingNames Man page
ospsuite_deprecated Man page
pkAnalysesAsDataFrame Man page Source code
pkAnalysesToDataFrame Man page Source code
pkAnalysesToTibble Man page Source code
pkParameterByName Man page Source code
plotGrid Man page
plotIndividualTimeProfile Man page Source code
plotObservedVsSimulated Man page Source code
plotObservedVsSimulatedWrongFoldDistance Source code
plotPopulationTimeProfile Man page Source code
plotResidualsVsSimulated Man page Source code
plotResidualsVsTime Man page Source code
plottingWithEmptyDataCombined Source code
populationAsDataFrame Man page Source code
populationToDataFrame Man page Source code
populationToTibble Man page Source code
potentialVariableParameterPathsFor Man page Source code
printMultipleEntries Source code
reexports Man page
removeAllUserDefinedPKParameters Man page Source code
removeSimulationFromCache Man page Source code
resetSimulationCache Man page Source code
residualsCanNotBeComputed Source code
runSensitivityAnalysis Man page Source code
runSimulation Man page Source code
runSimulationBatches Man page Source code
runSimulations Man page Source code
saveDataSetToPKML Man page Source code
saveSimulation Man page Source code
scaleParameterValues Man page Source code
setMoleculeInitialValues Man page Source code
setMoleculeScaleDivisors Man page Source code
setMoleculeValuesByPath Man page Source code
setOutputInterval Man page Source code
setOutputs Man page Source code
setParameterValues Man page Source code
setParameterValuesByPath Man page Source code
setQuantityValuesByPath Man page Source code
simBatchStartValueNaN Source code
simulationResultsToDataFrame Man page Source code
simulationResultsToTibble Man page Source code
splitPopulationFile Man page Source code
toBaseUnit Man page Source code
toDisplayUnit Man page Source code
toPathArray Man page Source code
toPathString Man page Source code
toUnit Man page Source code
uniqueEntities Man page Source code
unpairableDatasetsRemoved Source code
updatePKParameter Man page Source code
validateDimension Man page Source code
validateUnit Man page Source code
valueNotPositive Source code
valuesNotInterpolated Source code
wrongUnitForQuantity Source code
Open-Systems-Pharmacology/OSPSuite-R documentation built on April 28, 2024, 2:24 a.m.

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