HMap: Draw heatmap

In PNorvaisas/PFun: Framework For HT Workflows

Description

Draw heatmap

Usage

HMap(data, ID, feature, value, info, cols = list(), scalesel = "row",
  rnames = FALSE, reorder.rows = TRUE, reorder.columns = TRUE,
  name = "Z-score", cdr = "euclidean", cdc = "euclidean",
  cmr = "ward.D2", cmc = "ward.D2", rmax = 10)

Arguments

data	Data used for heatmap
ID	Observations in columns
feature	feature in rows
value	Value to be used in heatmap
info	Table with descriptors of interest
cols	Colorcoding list

Examples

HMap(data,ID,feature,value,info,cols=list(),scalesel='row',rnames=FALSE,reorder.rows=TRUE,reorder.columns=TRUE,name='Z-score',title="Heatmap",cdr="euclidean",cdc="euclidean",cmr="ward.D2",cmc="ward.D2",rmax=10)

PNorvaisas/PFun documentation built on May 20, 2019, 4:13 p.m.