remove_beads_from_fcs: Remove beads from a flowFrame object
In ParkerICI/premessa: R package for pre-processing of flow and mass cytometry data
View source: R/normalize_cytof.R
remove_beads_from_fcs R Documentation
Remove beads from a flowFrame object
Description
Remove beads from a flowFrame object
Usage
remove_beads_from_fcs(fcs, dist.threshold)
Arguments
fcs
The flowFrame object from which beads must be removed. Must contain a column
called beadDist representing the Mahalanobis distance of each event from the centroid
of the beads population
dist.threshold
The Mahalanobis distance threhsold for beads removal. Events with
beadDist <= dist.threshold will be removed
Value
Returns a list of two flowFrame objects
data.fcs The data without the beads events
beads.fcs The beads events
ParkerICI/premessa documentation built on Sept. 16, 2022, 3:06 p.m.
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
View source: R/normalize_cytof.R
| remove_beads_from_fcs | R Documentation |
Remove beads from a flowFrame object
Description
Remove beads from a flowFrame object
Usage
remove_beads_from_fcs(fcs, dist.threshold)
Arguments
fcs |
The |
dist.threshold |
The Mahalanobis distance threhsold for beads removal. Events with
|
Value
Returns a list of two flowFrame objects
data.fcsThe data without the beads eventsbeads.fcsThe beads events
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
Embedding an R snippet on your website
Add the following code to your website.
For more information on customizing the embed code, read Embedding Snippets.