ColantuoniAnnotation: Annotation of 266 gene expression samples collected in human...

In PeteHaitch/RUVcorr: Removal of unwanted variation for gene-gene correlations and related analysis.

Description

A dataset containing information about the samples found in the pre-processed gene expression dataset ColantuoniData.

Format

This data frame has 15 columns and 266 rows. The columns contain the following information about the 266 samples:

• ID. the sample identifier

• Submission. date of submission

• Last_Update. date of last update

• Array_Batch. number of batch

• Age. age of the individual

• Sex. sex of the individual

• Ethnicity. ethnicity of the individual

• PMI. value of PMI of sample

• PH. value of PH of sample

• RIN. value of RIN of sample

• Smoker. whether individual smoked

• Highest_Education. highest education of individual

• Brain_Bank_Source. source of brain

• period. period of individual

• description. description of period of individual

Source

Gene Expression Omnibus GSE30272 (http://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE30272)

References

Colantuoni C, Lipska BK, Ye T, Hyde TM et al. Temporal dynamics and genetic control of transcription in the human prefrontal cortex. Nature 2011 Oct 26;478(7370):519-23.

See Also

ColantuoniData for the gene expression measurements

PeteHaitch/RUVcorr documentation built on May 8, 2019, 1:31 a.m.