plotDesign: Plot nested design structure.

In PeteHaitch/RUVcorr: Removal of unwanted variation for gene-gene correlations and related analysis.

Description

plotDesign returns a plot with different color strips representing different factors relating to the study design. genes.

Usage

plotDesign(anno, Factors, anno.names = Factors, orderby = NULL)

Arguments

anno	A dataframe or matrix containing the annotation of the study.
Factors	A vector of factors that should be plotted.
anno.names	A vector containing the names, the default Factors.
orderby	A character describing an element in Factor by which the data should be ordered.

Value

plotDesign returns a plot.

Author(s)

Saskia Freytag

Examples

data(ColantuoniAnnotation)
plotDesign(ColantuoniAnnotation, c("Brain_Bank_Source", "Array_Batch"))

PeteHaitch/RUVcorr documentation built on May 8, 2019, 1:31 a.m.