Files in PeteHaitch/RUVcorr
Removal of unwanted variation for gene-gene correlations and related analysis.
DESCRIPTION
NAMESPACE
R/ColantuoniAnnotation.R
R/ColantuoniData.R
R/ECDFPlot.R
R/PCAPlot.R
R/RLEPlot.R
R/RUVNaiveRidge.R
R/RUVcorr.R
R/assessQuality.R
R/background.R
R/calculateEFDR.R
R/correlationPlot.R
R/empNegativeControls.R
R/findIQR.R
R/findMinmaxSamples.R
R/findWeights.R
R/genePlot.R
R/histogramPlot.R
R/is.optimizeParameters.R
R/is.simulateGEdata.R
R/makePosSemiDef.r
R/mashUp.R
R/optimizeParameters.R
R/plot.optimizeParameters.r
R/plotDesign.R
R/plotEFDR.R
R/print.simulateGEdata.R
R/prioritising.r
R/simulateGEdata.R
R/splitByFactor.R
R/wcor.R
data/.Rhistory
data/ColantuoniAnnotation.rda
data/ColantuoniData.rda
man/ColantuoniAnnotation.Rd
man/ColantuoniData.Rd
man/ECDFPlot.Rd
man/PCAPlot.Rd
man/RLEPlot.Rd
man/RUVNaiveRidge.Rd
man/RUVcorr.Rd
man/assessQuality.Rd
man/background.Rd
man/calculateEFDR.Rd
man/correlationPlot.Rd
man/empNegativeControls.Rd
man/findIQR.Rd
man/findMinmaxSamples.Rd
man/findWeights.Rd
man/genePlot.Rd
man/histogramPlot.Rd
man/is.optimizeParameters.Rd
man/is.simulateGEdata.Rd
man/makePosSemiDef.Rd
man/mashUp.Rd
man/optimizeParameters.Rd
man/plot.optimizeParameters.Rd
man/plotDesign.Rd
man/plotEFDR.Rd
man/print.simulateGEdata.Rd
man/prioritise.Rd
man/simulateGEdata.Rd
man/splitByFactor.Rd
man/wcor.Rd
vignettes/Bioc.bib
vignettes/RUVcorrVignette.Rnw
