R/ColantuoniAnnotation.R

In PeteHaitch/RUVcorr: Removal of unwanted variation for gene-gene correlations and related analysis.

#' Annotation of 266 gene expression samples collected in human brains
#' 
#' A dataset containing information about the samples found in the pre-processed 
#' gene expression dataset \code{ColantuoniData}.
#'
#' @format This data frame has 15 columns and 266 rows. The columns contain the 
#' following information about the 266 samples:
#' 
#' \itemize{
#'	\item ID. the sample identifier
#'	\item Submission. date of submission
#'	\item Last_Update. date of last update
#'	\item Array_Batch. number of batch
#'	\item Age. age of the individual
#'	\item Sex. sex of the individual
#'	\item Ethnicity. ethnicity of the individual
#'	\item PMI. value of PMI of sample
#'	\item PH. value of PH of sample
#'	\item RIN. value of RIN of sample
#'	\item Smoker. whether individual smoked
#'	\item Highest_Education. highest education of individual
#'	\item Brain_Bank_Source. source of brain
#'	\item period. period of individual
#'	\item description. description of period of individual
#' }
#'
#' @seealso \code{\link{ColantuoniData}} for the gene expression measurements
#' @source Gene Expression Omnibus GSE30272 
#' (\url{http://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE30272})
#' @references Colantuoni C, Lipska BK, Ye T, Hyde TM et al. 
#' Temporal dynamics and genetic control of transcription in the human prefrontal cortex. 
#' Nature 2011 Oct 26;478(7370):519-23.
#' @name ColantuoniAnnotation
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