API for PlantDefenseMetabolism/MetCirc
Navigating mass spectral similarity in high-resolution MS/MS metabolomics data
| Global functions | |
|---|---|
| MSP | Man page |
| MSP-class | Man page |
| NDP | Man page |
| [ | Man page |
| [,MSP,numeric-method | Man page |
| adduct | Man page Man page |
| adduct,MSP-method | Man page |
| adduct<- | Man page |
| adduct<-,MSP,character-method | Man page |
| allocatePrecursor2mz | Man page |
| binnedMSP | Man page |
| binning | Man page |
| cart2Polar | Man page |
| circosLegend | Man page |
| classes | Man page Man page |
| classes,MSP-method | Man page |
| classes<- | Man page |
| classes<-,MSP,character-method | Man page |
| combine | Man page |
| combine,MSP,MSP-method | Man page |
| combine,MSP-method | Man page |
| compartmentTissue | Man page |
| convert2MSP | Man page |
| convertExampleDF | Man page |
| convertMSP2MSP | Man page |
| createLink0Matrix | Man page |
| createLinkMatrix | Man page |
| createOrderedSimMat | Man page |
| createSimilarityMatrix | Man page |
| cutLinkMatrix | Man page |
| cutUniquePrecursor | Man page |
| finalMSP | Man page |
| getBegEndIndMSP | Man page |
| getLinkMatrixIndices | Man page |
| getPrecursorMZ | Man page Man page |
| getPrecursorMZ,MSP-method | Man page |
| getRT | Man page Man page |
| getRT,MSP-method | Man page |
| highlight | Man page |
| idMSMStoMSP-data | Man page |
| information | Man page Man page |
| information,MSP-method | Man page |
| information<- | Man page |
| information<-,MSP,character-method | Man page |
| length | Man page |
| length,MSP-method | Man page |
| minFragCart2Polar | Man page |
| msp2FunctionalLossesMSP | Man page |
| msp2msp | Man page |
| names | Man page |
| names,MSP-method | Man page |
| names<- | Man page |
| names<-,MSP,character-method | Man page |
| peaks | Man page |
| peaks,MSP-method | Man page Man page |
| plotCircos | Man page |
| printInformationSelect | Man page |
| sd01_outputXCMS | Man page |
| sd02_deconvoluted | Man page |
| shinyCircos | Man page |
| show | Man page |
| show,MSP-method | Man page |
| similarityMat | Man page |
| thresholdLinkMatrix | Man page |
| tissue | Man page |
| truncateName | Man page |
