getBegEndIndMSP: Get beginning and end indices of each entry in a 'data.frame'...
In PlantDefenseMetabolism/MetCirc: Navigating mass spectral similarity in high-resolution MS/MS metabolomics data
Description
Usage
Arguments
Details
Value
Author(s)
Examples
Description
Get beginning and end indices of each entry in a
data.frame in a peaks(MSP)-object
Usage
1
getBegEndIndMSP(msp)
Arguments
msp
data.frame in peaks(MSP)-object, see
?convert2MSP for further information
Details
Internal use to retrieve start and end row indices for fragments of
MS/MS features.
Value
getBegEndIndMSP returns a list of length 2 where the first
entry contains the start indices and the second the end indices
Author(s)
Thomas Naake, thomasnaake@googlemail.com
Examples
1
2
3
4
5
data("sd02_deconvoluted", package = "MetCirc")
finalMSP <- convert2MSP(sd02_deconvoluted, split = " _ ",
splitIndMZ = 2, splitIndRT = 3)
finalMSPdf <- peaks(finalMSP)
getBegEndIndMSP(finalMSPdf)
PlantDefenseMetabolism/MetCirc documentation built on May 8, 2019, 2:52 p.m.
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
Description Usage Arguments Details Value Author(s) Examples
Description
Get beginning and end indices of each entry in a
data.frame in a peaks(MSP)-object
Usage
1 | getBegEndIndMSP(msp)
|
Arguments
msp |
|
Details
Internal use to retrieve start and end row indices for fragments of MS/MS features.
Value
getBegEndIndMSP returns a list of length 2 where the first
entry contains the start indices and the second the end indices
Author(s)
Thomas Naake, thomasnaake@googlemail.com
Examples
1 2 3 4 5 | data("sd02_deconvoluted", package = "MetCirc")
finalMSP <- convert2MSP(sd02_deconvoluted, split = " _ ",
splitIndMZ = 2, splitIndRT = 3)
finalMSPdf <- peaks(finalMSP)
getBegEndIndMSP(finalMSPdf)
|
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
Embedding an R snippet on your website
Add the following code to your website.
For more information on customizing the embed code, read Embedding Snippets.