asinhVoom: Modifications to 'voom'
In PratheepaJ/bootLong: The Block Bootstrap Method for Longitudinal Count Data
Description
Usage
Arguments
Value
Description
Computes the observation level weight based on the mean-variance relationship.
Usage
1
Arguments
counts
A numeric matrix of otu_table.
design
A design matrix with rows corresponding to samples and columns to coefficients to be estimated. Defaults to the unit vector meaning that samples are treated as replicates.
sj
A numeric vector containing library size normalization factor based on the median-ratio method.
span
A numeric. Width of the lowess smoothing window as a proportion.
plot
A logical, should a plot of the mean-variance trend be displayed?
Value
A matrix of variance stablized counts.
PratheepaJ/bootLong documentation built on April 5, 2020, 2:19 p.m.
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Description Usage Arguments Value
Description
Computes the observation level weight based on the mean-variance relationship.
Usage
1 |
Arguments
counts |
A numeric matrix of otu_table. |
design |
A design matrix with rows corresponding to samples and columns to coefficients to be estimated. Defaults to the unit vector meaning that samples are treated as replicates. |
sj |
A numeric vector containing library size normalization factor based on the median-ratio method. |
span |
A numeric. Width of the lowess smoothing window as a proportion. |
plot |
A logical, should a plot of the mean-variance trend be displayed? |
Value
A matrix of variance stablized counts.
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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