longVarioSingle: Plot the variogram given the taxon index.

In PratheepaJ/bootLong: The Block Bootstrap Method for Longitudinal Count Data

Description

Plot the variogram given the taxon index.

Usage

longVarioSingle(ps, main_factor, time_var, subjectID_var, taxon,
  point = FALSE, taxlevel = "Species")

Arguments

ps	(Required). A phyloseq-class.
main_factor	Character string. The name of the variable to map main factor in the plot (factor vector).
time_var	Character string. The name of the variable to map time in the plot (integer vector).
subjectID_var	Character string. The name of the variable to map Subject Ids in the plot (factor vector).
taxon	Numeric, index of taxon to get the correlogram
point	Logical. Whether variogram with observed values.
taxlevel	Character string. The taxonomy level for the plot title

Value

ggplot object of variogram

PratheepaJ/bootLong documentation built on April 5, 2020, 2:19 p.m.